Emma Draper, PharmD
PGY-1 Pharmacy Resident
Rochester General Hospital
Rochester, New York
Greta Staubly, PharmD
PGY-1 Pharmacy Resident
Rochester General Hospital
Rochester, New York
Sean M. Stainton, PharmD
Infectious Diseases Clinical Pharmacy Specialist
Rochester General Hospital
Rochester, New York
John Cao, PharmD, BCPS, BCIDP
Infectious Diseases Clinical Pharmacy Specialist
Rochester General Hospital
Rochester, New York



This annual review is intended to be a reference to describe the potential in vivo activity of various antimicrobial agents when the identity of the infecting organism is known. Because the early initiation of appropriate therapy has been noted to improve clinical outcomes in patients with serious infections, empiric therapy frequently demands the use of a broad-spectrum antimicrobial agent until the specific infecting bacteria have been identified.

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Given continuing concerns of increasing antimicrobial resistance among gram-positive and gram-negative bacteria—and the lack of new antibiotics coming to market—knowledge of microbiological activity and clinical treatment guidelines will permit the highest likelihood of providing appropriate antibiotic therapy to patients while minimizing use of unnecessary agents.

Of note, antimicrobial susceptibilities can be highly variable based on institution-specific and geographic factors, including various institutional sites (eg, outpatient vs inpatient, ICU vs ward). Therefore, awareness of local susceptibility data is essential to ensure the highest probability of successful clinical outcomes.

Although the use of various dosing techniques, especially for beta-lactams, may potentiate in vivo activity, the information contained herein pertains only to standard dosing regimens. This review reflects the opinions of the authors and is intended to be a general guide to antimicrobial applications, with the appreciation that host factors (eg, site of infection, clinical picture, and comorbid conditions) could greatly affect antimicrobial selection.

Key

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First-line agent based on clinical efficacy, susceptibility patterns, and consideration of antimicrobial stewardship and cost of care.

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Alternative drug based on clinical efficacy and susceptibility patterns.

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Drug with limited clinical efficacy data, a low level of activity against this organism, or both.

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Either there are insufficient clinical data or this drug should not be used for this organism.

 

Tables 1–3

Antimicrobial Efficacy for Selected Pathogen:
 
Penicillins, Carbapenems, and Monobactams
 
Amoxicillin
 
Ampicillin
 
Cloxacillin/dicloxacillin
 
Nafcillin/oxacillin
 
Penicillin G
 
Penicillin V
 
Amoxicillin-clavulanate
 
Ampicillin-sulbactam
 
Piperacillin-tazobactam
 
 
Doripenem
 
Ertapenem
 
Meropenem
 
Imipenem-cilastatin
 
Imipenem-cilastatin-relebactam
 
Meropenem-vaborbactam
 
 
Aztreonam
 
Cephalosporins
 
 
Cefadroxil
 
Cefazolin
 
Cephalexin
 
 
Cefaclor
 
Cefotetan
 
Cefoxitin
 
Cefuroxime
 
 
Cefdinir
 
Cefotaxime
 
Cefpodoxime proxetil
 
Ceftazidime
 
Ceftriaxone
 
 
Cefepime
 
 
Ceftaroline
 
 
Ceftazidime-avibactam
 
Ceftolozane-tazobactam
 
Cefiderocol
 
Aminoglycosides, Macrolides, Quinolones, Other Antibiotics
 
Amikacin
 
Gentamicin
 
Plazomicinac
 
Streptomycin
 
Tobramycin
 
 
Azithromycin
 
Clarithromycin
 
Erythromycin
 
Fidaxomicin
 
 
Ciprofloxacin
 
Delafloxacin
 
Levofloxacin
 
Moxifloxacin
 
 
Tetracyclines (eg, doxycycline, minocycline)t
 
Eravacycline
 
Omadacycline
 
Tigecycline
 
 
Vancomycin
 
 
Dalbavancinz
 
Oritavancin
 
Telavancin
 
 
Linezolid
 
Tedizolid
 
 
Chloramphenicol
 
Clindamycin
 
Colistin/polymixin B
 
Daptomycins
 
Lefamulin
 
Metronidazole
 
Quinupristin-dalfopristin
 
Rifampin
 
Durlobactam-sulbactam
 
Telithromycin
 
Trimethoprim-sulfamethoxazole
 
 
Fosfomycin (oral formulation only)
 
Nitrofurantoin
 
Pivmecillinam
 
Select a pathogen from the list below to see the efficacy score for each of the listed agents.
 
 
Moraxella catarrhalis
Neisseria gonorrhoeaea
Neisseria meningitidisag
 
Bordetella pertussis
Brucella spp.b
Campylobacter jejuni
 
Chlamydophila pneumoniae (TWAR)
Chlamydophila psittaci
Chlamydia trachomatis
Francisella tularensis
Haemophilus ducreyi
Haemophilus influenzaed
Helicobacter pyloric
Legionella pneumophila
 
Citrobacter spp.e
Enterobacter spp.e,f
Escherichia colif,g
Klebsiella spp.f,g,ad
Morganella morganii
Proteus mirabilis
Proteus vulgaris
Providencia stuartii
Salmonella spp.
Salmonella typhi
Serratia spp.
Shigella spp.
 
 
Acinetobacter spp.h
Burkholderia cepacia complexh
Pseudomonas aeruginosah
Stenotrophomonas maltophilia
 
Pasteurella multocida
Vibrio cholerae
 
 
 
Enterococcus faecalis
Vancomycin-resistant Enterococcus faecalis
Enterococcus faecium
Vancomycin-resistant Enterococcus faecium
Aerococcus urinae
Methicillin-susceptible Staphylococcus aureus
Methicillin-resistant Staphylococcus aureusv
Methicillin-susceptible Staphylococcus epidermidis
Methicillin-resistant Staphylococcus epidermidis
Streptococcus Group A (S. pyogenes)
Streptococcus Group B (S. agalactiae)
Streptococcus Group D (eg, S. bovis)
Streptococcus Group F (eg, S. anginosus)
Streptococcus pneumoniaei
Penicillin-resistant Streptococcus pneumoniaej,k
Viridans streptococci
 
 
Actinomyces israelii
Nocardia spp.
Bacillus anthracisl
Corynebacterium diphtheriaem
Corynebacterium jeikeium
Gardnerella vaginalisn
Listeria monocytogeneso
 
 
Bacteroides fragilis
Capnocytophaga canimorsus
Fusobacterium spp.
Hafnia alvei spp.
Prevotella melaninogenica
 
Clostridioides difficilep
Clostridium perfringens
Clostridium tetani
Cutibacterium acnes
Peptostreptococcus spp.
 
Mycoplasma pneumoniae
Ureaplasma urealyticum
 
Anaplasma spp
Borrelia burgdorferi (Lyme disease)q
Borrelia recurrentis
Ehrlichia spp.
Leptospira spp.
Rickettsia spp.
Treponema pallidum


 
 

Table 4. Multidrug Resistance

Activity against beta-lactamasesCoverage against beta-lactam–resistant isolates
DrugKPCOXA-48Other OXANDMVIMIMPAmpCKPC (CRE)MBL (CRE)DTR-PsAA. baumanniiS. maltophilia
Ceftolozane-tazobactam         1  
Durlobactam-sulbactam          1 
Meropenem-vaborbactam1     31    
Imipenem-cilastatin-relebactam2     32 2  
Ceftazidime-avibactam21 11111132112 11
Cefiderocol233222332332
1 Must be used in synergy with aztreonam.
Based on https://www.idsociety.org/practice-guideline/amr-guidance/#AmpC%CE%B2-Lactamase-ProducingEnterobacterales; https://pubmed.ncbi.nlm.nih.gov/34849997/

Table 5. AmpC Inducers

AmpC resistance
Moderate/high-risk inducersRecommended treatmentAvoid
Citrobacter freundiiNitrofurantoin1Ceftazidime
Enterobacter cloacae complexCarbapenem2Cefotaxime
Klebsiella aerogenesTrimethoprim-sulfamethoxazole3,4Piperacillin-tazobactam
Hafnia alveiCefepimeCeftriaxone3
Yersinia enterocoliticaAminoglycosides4 Fluoroquinolones5,6 Refer to Table 4 for broader last-line optionsAmpicillin-sulbactam
MIC, minimum inhibitory concentration.
1 Preferred options for AmpC uncomplicated cystitis.
2 Preferred option when cefepime MIC =4 mcg/mL, assuming carbapenem susceptibility is demonstrated.
3 Reasonable for uncomplicated cystitis caused by these organisms when susceptibility is demonstrated.
4 Alternative option for AmpC uncomplicated cystitis, pyelonephritis, and complicated urinary tract infection.
5 Can be considered for the treatment of invasive infections caused by moderate- to high-risk AmpC inducers.
6 Alternative options for AmpC uncomplicated cystitis.

Footnotes

a Resistance to penicillin, tetracycline, and ciprofloxacin may be as high as 16.2%, 25.3%, and 19.2%, respectively, according to a 2014 report; dual therapy with ceftriaxone plus azithromycin is the only recommended gonorrhea treatment.

b Use a combination, eg, doxycycline with gentamicin or rifampin or doxycycline with trimethoprim-sulfamethoxazole and chloramphenicol.

c Combination therapies with high eradication rates include omeprazole + clarithromycin + amoxicillin as well as bismuth subsalicylate + metronidazole + tetracycline. However, metronidazole resistance has risen significantly.

d Up to 50% of Haemophilus influenzae strains are capable of producing beta-lactamases.

e Citrobacter spp and Enterobacter spp may differ in susceptibility patterns. Consult individual test results for appropriate choice.

f Carbapenem-resistant enterobacterales (CRE) are increasing and are endemic in certain geographic regions. Viable treatment options are limited and should be based on susceptibilities. For serious CRE infections, ceftazidime-avibactam or meropenem-vaborbactam should be preferred. Due to poor clinical outcomes with monotherapy, combination therapy with an aminoglycoside, including plazomicin (see footnote ac), colistin/polymyxin B, or tigecycline, based on local susceptibility results, is encouraged.

g A significant number of strains are capable of producing extended-spectrum beta-lactamases (ESBL). Consider this possibility according to antibiogram, patient’s history, and local resistance patterns. In suspected or proven cases, use carbapenems or proper non–beta-lactam antibiotics based on susceptibility studies.

h Combination therapy is suggested, particularly during empiric treatment until susceptibility results are finalized.

i When parenteral penicillin is used to treat a non-CNS pneumococcal infection, 94.8% of isolates are susceptible, 3.1% are intermediate, and 2.1% are resistant. Approximately 10% and 24% of Streptococcus pneumoniae strains in the United States are resistant to clindamycin and macrolides, respectively.

j PRSP (penicillin-resistant S. pneumoniae) is defined as nonsusceptible to penicillin with an minimum inhibitory concentration >_8 mcg/mL for non-CNS infections (parenteral therapy), >_2 mcg/mL for non-CNS infections (oral therapy), and >_0.12 mcg/mL for CNS infections.

k Amoxicillin doses of 80-90 mg/kg/d may be effective against non-meningeal PRSP infections.

l For updates, see https://bit.ly/2JMRyQf.

m Membranous pharyngitis treated with antitoxin and IV erythromycin (antimicrobials used to decrease toxin production and bacterial spread).

n New classification: Bacteria are gram-variable.

o Aminoglycosides (gentamicin) may be synergistic with beta-lactams.

p Oral vancomycin is recommended as first-line therapy for initial episodes of Clostridioides difficile infection (CDI), regardless of the severity of presentation. Fidaxomicin was found to be noninferior to oral vancomycin in treating CDI and superior in preventing recurrences of non-NAP1/BI/027 strains; therefore, it is also a first-line option. Metronidazole is no longer recommended for first episodes of CDI unless vancomycin and fidaxomicin are contraindicated or unavailable.

q Stage of disease determines choice of treatment. Consult specific references.

r Fluoroquinolone resistance rates can vary greatly against P. aeruginosa, Acinetobacter spp, and the enterobacterales. Use as empiric therapy against these organisms should be based on local susceptibilities.

s Despite its potent in vitro activity against S. pneumoniae, daptomycin is not indicated for the treatment of pneumonia, due to extensive binding to pulmonary surfactant, which results in clinical failure.

t The specific tetracycline recommended varies. For methicillin-resistant Staphylococcus aureus, minocycline is most active among class. Consult specific references.

u These agents generally are recommended for urinary tract infections (UTIs) only. Use of the “1” to “3” scale refers to activity for treatment of UTIs.

v Vancomycin is considered first-line when IV therapy is required. Dalbavancin or oritavancin may be considered first-line treatment for acute bacterial skin and skin structure infections caused by CA-MRSA in EDs with adequate clinical pathways for follow-up. Ceftaroline, daptomycin, linezolid, tedizolid, telavancin, and tigecycline may be suitable alternatives in specified patients. Tetracyclines, clindamycin, trimethoprim-sulfamethoxazole, macrolides, tedizolid, and linezolid are viable alternatives when oral therapy can be used. In the face of erythromycin resistance, clindamycin should be considered only if the isolate is D-test–negative.

w Vancomycin is considered first-line when IV therapy is required. In recent years, vancomycin MICs have gradually increased for S. aureus and have included an increased occurrence of heteroresistance. Clinical reports have associated this loss of in vitro potency with vancomycin clinical failures in a number of patients. Alternative therapies such as ceftaroline, daptomycin, linezolid, telavancin, and tigecycline should be considered in the appropriate clinical setting. Consult specific references.

x Effective choice for meningeal infections if the ceftriaxone/cefotaxime MIC <0.5 mcg/mL.

y Dalbavancin is not active against vancomycin-resistant enterococci (VRE) exhibiting vanA resistance.

z Dalbavancin may be given as either a single dose of 1,500 mg or as 1,000 mg administered on day 1 followed by 500 mg on day 8 for patients with normal kidney function.

aa Higher doses of daptomycin (>8 mg/kg) have resulted in reduced mortality and may be associated with improved microbiological outcomes in the setting of VRE bacteremia.

ab The sulbactam component of ampicillin-sulbactam has in vitro activity against some Acinetobacter baumannii and has been used successfully to treat serious Acinetobacter infections when the organism was reported to be susceptible. High-dose recommendation.

ac Plazomicin is approved for the treatment of adults with complicated UTIs, including pyelonephritis due to certain enterobacterales. Due to limited clinical and safety data, it should be reserved for patients with limited or no alternative treatment options. In particular, plazomicin is active against CRE that produce most aminoglycoside-modifying enzymes that inactivate other aminoglycoside antibiotics. Data from patients with bloodstream infections due to CRE suggest it may play a role when combined with another antibiotic.

ad Enterobacter aerogenes now reclassified as Klebsiella aerogenes.

ae Inducible AmpC resistance genes may render this agent ineffective against this organism.

af In clinical trials, the use of cefiderocol among patients with Serratia infections was limited to those with ventilator-associated pneumonia only.

ag Agents used to treat this organism should be optimized to achieve therapeutic concentrations within the CNS.

ah This recommendation is based on preclinical studies alone, ie, in vitro studies and in vivo animal models.

ai Must be used in synergy with aztreonam.


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